BioEdit Installation:
Bioedit is a DNA/protein sequence editor program designed for windows. This is first video in a series of videos targeted to introduce different functions of BioEdit. In This video shows simple steps involved in downloading and installing the program. The zipped installer can be downloaded from http://www.mbio.ncsu.edu/BioEdit/BioEdit.zip
the homepage of the Bioedit is http://www.mbio.ncsu.edu/bioedit/bioedit.html
the homepage of the Bioedit is http://www.mbio.ncsu.edu/bioedit/bioedit.html
Open and Save sequences in BioEdit
This Video tutorial to demonstrates different ways of getting sequences in and out of BioEdit. BioEdit can read many formats including most commonly used fasta (.fa, .fas, .fasta), Genbank (.gb or .gbk) and clustal (.aln) formats. Sequences can be opened in their individual windows inside main BioEdit window by using "File->open" or clicking the folder button at the top left corner. If you have a sequence open and want to get other sequences in the existing window, use "File->Import" option or "File-> Import from Clipboard' option. If you have set BioEdit as a default program to open sequence files, then double clicking the sequence file will automatically open it in new BioEdit window.
Basic Editing in BioEdit
This video tutorial will introduce you with some basic sequence editing functions of BioEdit. BioEdit user interface allows users to add or delete bases, drag a base or block of sequence, insert or delete gaps in between sequences...
Add MUSCLE alignment software to BioEdit
One of the features of BioEdit is the addition of external softwares to the BioEdit Menu. This video demonstrates the addition of MUSCLE as external software for sequence alignment. Once MUSCLE is added, user can use MUSCLE instead of ClustalW to align selected sequences.